Differences between revisions 2 and 23 (spanning 21 versions)

CLaMS on JURECA

Access to JURECA

CVS on JURECA

Compile and execute CLaMS programs

Software on JURECA

Using NetCDF

Create Libraries (ifort 19.0.0)

Create Libraries (ifort 17.0.2)

Create Libraries with Stages/2016a

Use Libraries with Stages/2016a

-  ⇤ ← Revision 2 as of 2015-01-13 11:31:12 → 
  Size: 2144
  Editor: NicoleThomas
  Comment:
+   ← Revision 23 as of 2018-11-09 12:12:11 → ⇥
  Size: 567
  Editor: NicoleThomas
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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+## page was renamed from Juropatest
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-= CLaMS on JUROPATEST =
+= CLaMS on JURECA =
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-== Access to Juropatest ==
+[[ /Access | Access to JURECA ]]
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+Line 8:
-The Juropatest system is available by two Login nodes:
 {{{
ssh -X userid@juropatest1.fz-juelich.de
ssh -X userid@juropatest2.fz-juelich.de
}}}
+[[ /CVS | CVS on JURECA ]]
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+Line 10:
-== Software on Juropatest ==
+[[ /CompileExecute | Compile and execute CLaMS programs ]]
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- * Access to installed software on JUROPATEST is organized through a hierarchy of modules.
+[[ /Software | Software on JURECA ]]
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+Line 14:
- * Show what modules are compatible available to load right now (given the toolchain modules you have already loaded):
 {{{
module avail
}}}
+[[ /Netcdf | Using NetCDF ]]
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+Line 16:
- * Load a specific version of a module
 {{{
module load <modulename>/<moduleversion>
}}}
+[[ /LibrariesIfort19 | Create Libraries (ifort 19.0.0) ]]
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+Line 18:
- * List what modules are currently loaded
 {{{
module list
}}}
+[[ /LibrariesIfort17 | Create Libraries (ifort 17.0.2) ]]
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+Line 20:
- * Unload a module
 {{{
module unload <modulename>/<moduleversion>
}}}
+[[ /Libraries2016aCreate | Create Libraries with Stages/2016a ]]
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- * Unload all modules
 {{{
module purge
}}}

 * Find the location of a module within the module hierarchy
 {{{
module spider <modulename>
}}}

 * Show how to load NetCDF:
 {{{
module -r spider '.*netCDF.*'
}}}


== Using NetCDF on Juropatest ==

 * Loading NetCDF Module
 {{{
module load intel-para netCDF-Fortran/4.2
or
module load icc/2015.0.090 ifort/2015.0.090 psmpi/5.1.0-1 netCDF-Fortran/4.2
}}}

 * Compilerversions loaded by intel-param (08.01.2015):
  * gcc-Version 4.4.7 20120313 (Red Hat 4.4.7-4) (GCC) 
  * icc version 15.0.0 (gcc version 4.4.7 compatibility)
  * ifort version 15.0.0


 * If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include path).

 * Compile Fortran program with NetCDF:
 {{{
ifort -o progname progname.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz
}}}

== Compile and Execute CLaMS programs on JUROPATEST ==

 * Load following modules
 {{{
module load intel-para netCDF-Fortran/4.2
}}}

 * Add current directory to PATH in .profile:
 {{{
PATH=.:$PATH
export PATH
}}}

 * The libraries used by CLaMS are installed in directory /homec/jicg11/jicg1108

 * The CLaMS programs can be compiled with:
 {{{
make [useMPI=true] progname
}}}

[[ /Libraries | Used Libraries ]]
+[[ /Libraries2016aUse | Use Libraries with Stages/2016a ]]