Differences between revisions 4 and 15 (spanning 11 versions)
Revision 4 as of 2011-05-06 10:04:35
Size: 1481
Editor: NicoleThomas
Comment:
Revision 15 as of 2015-11-18 08:09:34
Size: 1028
Editor: NicoleThomas
Comment:
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
## page was renamed from HowToParallel
= HowToParallel =

=== Portland Compiler ===

It is possible to run CLaMS on multi-processor machines using MPI or OpenMP.

On the Ubuntu machines the PGF compiler suite is installed that has MPICH implemented.

In the following a short How to:

First it is necessary to make the path of the MPI libraries public by executing:

for 64bit machines:

{{{
. /opt/pgi/linux86-64/10.4/mpi.sh
}}}

for 32bit machines:

{{{
. /opt/pgi/linux86/10.4/mpi.sh
}}}

Then compile the needed programs by executing:

{{{
make useMPI=true
}}}

Before running the CLaMS script or a single program you have to execute:

{{{
ssh-add
}}}

This is necessary, because the processes communicate per ssh.

The programs must be called as following:

{{{
mpirun -np # program

# - number of processors

}}}
#acl ClamsUserGroup:read,write,delete,revert All:read
Line 50: Line 4:
=== Intel Compiler === ## page was renamed from HowToParallel
== ParallelHowTo ==
Line 52: Line 7:
The MPICH2 Library (1.3.2p1) is installed in directory ''/usr/local/icg/icg1/local/mpich2-intel'' (for Intel C and Fortran compilers). <<TableOfContents>>
Line 54: Line 9:
Add the bin subdirectory of the installation directory to your path:
{{{
PATH=/usr/local/icg/icg1/local/mpich2-intel/bin:$PATH
It is possible to run CLaMS on multi-processor machines using MPI.


=== Intel Compiler 14.0.3 ===

 The MPICH Library is installed in directory ''/usr/nfs/local/local/mpich-intel''.
 Add the bin subdirectory of the installation directory of MPICH library to your path:
 {{{
PATH=/usr/nfs/local/local/mpich-intel/bin:$PATH
Line 60: Line 21:
To read the man pages set MANPATH to the following:
{{{
MANPATH=/usr/local/icg/icg1/local/mpich2-intel/share/man:$MANPATH
export MANPATH
 Clams programs can be compiled with:
 {{{
make useMPI=true [useComp=ifc] progname
Line 66: Line 26:
The programs can be compiled with:
{{{
make useComp=ifc useMPI=true <progname>
 Execute on <n> CPUs:
 {{{
mpiexec|mpirun -np <n> <progname>
Line 71: Line 31:
Execute on <n> CPUs:
{{{
mpiexec -np <n> <progname>
=== Portland Compiler 14.6 ===

 It is necessary to make the path of the MPI libraries (included in the portland compiler suite) public by executing:
 {{{
. /opt/pgi/linux86-64/14.6/mpi.sh
Line 75: Line 37:

 Clams programs can be compiled with:
 {{{
make useMPI=true [useComp=pgi] progname
}}}

 Execute on <n> CPUs:
 {{{
mpiexec|mpirun -np <n> <progname>
}}}

ParallelHowTo

It is possible to run CLaMS on multi-processor machines using MPI.

Intel Compiler 14.0.3

  • The MPICH Library is installed in directory /usr/nfs/local/local/mpich-intel. Add the bin subdirectory of the installation directory of MPICH library to your path:

    PATH=/usr/nfs/local/local/mpich-intel/bin:$PATH
    export PATH
    Clams programs can be compiled with:
    make useMPI=true [useComp=ifc] progname

    Execute on <n> CPUs:

    mpiexec|mpirun -np <n> <progname>

Portland Compiler 14.6

  • It is necessary to make the path of the MPI libraries (included in the portland compiler suite) public by executing:
    . /opt/pgi/linux86-64/14.6/mpi.sh
    Clams programs can be compiled with:
    make useMPI=true [useComp=pgi] progname

    Execute on <n> CPUs:

    mpiexec|mpirun -np <n> <progname>