Diff for "Jureca/LibrariesIfort17"

Differences between revisions 2 and 21 (spanning 19 versions)

Install Libraries on JURECA with ifort 17.0.0 and Parastation MPI

The libraries used by CLaMS are installed in directory /homec/jicg11/jicg1108

load modules

module purge
module load intel-para
module load netCDF-Fortran

qhull

Possibly the name of the C-routine qhull_dll in file unix.c must be adjusted: for gcc it must be qhull_dll_ !

cd ~/qhull
make new  
mv libqhull.a libqhull_gcc5.4.0.a

cd ~/clams_lib
ln -sf ../qhull/libqhull_gcc5.4.0.a ./libqhull.a

cd ~
chmod -R 755 qhull

numrec

cd ~/numrec-f90

mkdir lib_ifort17.0.0
mkdir mod_ifort17.0.0
mkdir obj_ifort17.0.0

in Makefile.numrec:

   F90 = ifort
   objDir = obj_ifort17.0.0
   modDir = mod_ifort17.0.0
   libDir = lib_ifort17.0.0

make -f Makefile.numrec  new

The following error occurs:
catastrophic error: **Internal compiler error: internal abort** Please report this error along with the circumstances in which it occurred in a Software Problem Report. Note: File and line given may not be explicit cause of this error. compilation aborted for src/sprsin.f90 (code 1)

=> in Makefile.numrec: sprsin removed from progfilelist !!!

cd ~/clams_lib
ln -sf ../numrec-f90/lib_ifort17.0.0/libnumrec.a .

cd ~/clams_mod
ln -sf ../numrec-f90/mod_ifort17.0.0/nr.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrtype.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrutil.mod .

cd ~
chmod -R 755 numrec-f90

netcdf

Netcdf is installed on Jureca for different C and Fortran compiler versions.
If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include paths).

Compile Fortran program with NetCDF:

ifort -o progname progname.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz

After loading the netcdf module the following environment variables are expanded:
- PATH includes directory with netcdf binaries (ncdump)
- CPATH includes directory with include-files and netcdf-modules
- LD_LIBRARY_PATH includes directories with all needed libraries (netcdf, hdf5, zlib etc)

utils

Following files were adapted:

utils/Makefile
mkincl/platform.mk
mkincl/config/config.Linux_ifc

cd ~/utils

make theLibrary

cd ~/clams_lib
ln -sf ../utils/lib_linux_ifc_17.0.0/libutils-icg1.a .

cd ~/clams_mod
ln -sf ../utils/mod_linux_ifc_17.0.0/* .

cd ~
chmod -R 755 utils

-  ⇤ ← Revision 2 as of 2015-01-13 10:09:43 → 
  Size: 2287
  Editor: NicoleThomas
  Comment:
+   ← Revision 21 as of 2017-02-02 10:19:51 → ⇥
  Size: 2668
  Editor: NicoleThomas
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 1:
-== Install Libraries on JUROPATEST ==
+## page was renamed from Juropatest/Libraries
== Install Libraries on JURECA with ifort 17.0.0 and Parastation MPI ==
-Line 5:
+Line 6:
+=== load modules ===
 {{{
module purge
module load intel-para
module load netCDF-Fortran
}}}
-Line 6:
+Line 14:
+Possibly the name of the C-routine ''qhull_dll'' in file ''unix.c'' must be adjusted:  for gcc it must be '''qhull_dll_''' !
-Line 9:
+Line 19:
-make new  (Compilation mit gcc, s. Makefile)
mv libqhull.a libqhull_gcc4.4.7.a
+make new  
mv libqhull.a libqhull_gcc5.4.0.a
-Line 13:
+Line 23:
-ln -sf ../qhull/libqhull_gcc4.4.7.a ./libqhull.a
+ln -sf ../qhull/libqhull_gcc5.4.0.a ./libqhull.a
-Line 18:
+Line 28:
-Line 24:
+Line 35:
-mkdir lib_ifort15.0.0
mkdir mod_ifort15.0.0
mkdir obj_ifort15.0.0
+mkdir lib_ifort17.0.0
mkdir mod_ifort17.0.0
mkdir obj_ifort17.0.0
-Line 32:
+Line 43:
-   objDir = obj_ifort15.0.0
   modDir = mod_ifort15.0.0
   libDir = lib_ifort15.0.0
+   objDir = obj_ifort17.0.0
   modDir = mod_ifort17.0.0
   libDir = lib_ifort17.0.0
-Line 48:
+Line 59:
-ln -sf ../numrec-f90/lib_ifort15.0.0/libnumrec.a .
+ln -sf ../numrec-f90/lib_ifort17.0.0/libnumrec.a .

cd ~/clams_mod
ln -sf ../numrec-f90/mod_ifort17.0.0/nr.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrtype.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrutil.mod .
-Line 51:
+Line 67:
-chmod -R 755 numrec
+chmod -R 755 numrec-f90
-Line 56:
+Line 72:
- * Netcdf is installed on Juropatest for different C and Fortran compiler versions.

 * Load netcdf module:
 {{{
module load intel-para netCDF-Fortran/4.2
}}}
+ * Netcdf is installed on Jureca for different C and Fortran compiler versions.
-Line 78:
+Line 89:
-Line 84:
+Line 96:
+cd ~/utils
-Line 87:
+Line 101:
-ln -sf ../utils/lib_linux_ifc_15.0.0/libutils-icg1.a .
+ln -sf ../utils/lib_linux_ifc_17.0.0/libutils-icg1.a .
-Line 90:
+Line 104:
-ln -sf ../utils/mod_linux_ifc_15.0.0/* .
+ln -sf ../utils/mod_linux_ifc_17.0.0/* .