Diff for "Jureca/LibrariesIfort17"

Differences between revisions 12 and 16 (spanning 4 versions)

Install Libraries on JURECA

The libraries used by CLaMS are installed in directory /homec/jicg11/jicg1108

qhull

Possibly the name of the C-routine qhull_dll in file unix.c must be adjusted: for gcc it must be qhull_dll_ !

cd ~/qhull
make new  
mv libqhull.a libqhull_gcc5.4.0.a

cd ~/clams_lib
ln -sf ../qhull/libqhull_gcc5.4.0.a ./libqhull.a

cd ~
chmod -R 755 qhull

numrec

cd ~/numrec-f90

mkdir lib_ifort17.0.0
mkdir mod_ifort17.0.0
mkdir obj_ifort17.0.0

in Makefile.numrec:

   F90 = ifort
   objDir = obj_ifort17.0.0
   modDir = mod_ifort17.0.0
   libDir = lib_ifort17.0.0

make -f Makefile.numrec  new

The following error occurs:
catastrophic error: **Internal compiler error: internal abort** Please report this error along with the circumstances in which it occurred in a Software Problem Report. Note: File and line given may not be explicit cause of this error. compilation aborted for src/sprsin.f90 (code 1)

=> in Makefile.numrec: sprsin removed from progfilelist !!!

cd ~/clams_lib
ln -sf ../numrec-f90/lib_ifort17.0.0/libnumrec.a .

cd ~/clams_mod
ln -sf ../numrec-f90/mod_ifort17.0.0/nr.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrtype.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrutil.mod .

cd ~
chmod -R 755 numrec-f90

netcdf

Netcdf is installed on Jureca for different C and Fortran compiler versions.

Load netcdf module:

module load intel-para netCDF-Fortran/4.4.4

If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include paths).

Compile Fortran program with NetCDF:

ifort -o progname progname.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz

After loading the netcdf module the following environment variables are expanded:
- PATH includes directory with netcdf binaries (ncdump)
- CPATH includes directory with include-files and netcdf-modules
- LD_LIBRARY_PATH includes directories with all needed libraries (netcdf, hdf5, zlib etc)

utils

Following files were adapted:

utils/Makefile
mkincl/platform.mk
mkincl/config/config.Linux_ifc

cd ~/utils

make theLibrary

cd ~/clams_lib
ln -sf ../utils/lib_linux_ifc_17.0.0/libutils-icg1.a .

cd ~/clams_mod
ln -sf ../utils/mod_linux_ifc_17.0.0/* .

cd ~
chmod -R 755 utils

-  ⇤ ← Revision 12 as of 2016-11-23 08:18:06 → 
  Size: 2630
  Editor: NicoleThomas
  Comment:
+   ← Revision 16 as of 2017-01-13 09:27:11 → ⇥
  Size: 2611
  Editor: NicoleThomas
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 13:
-mv libqhull.a libqhull_gcc4.9.2.a
+mv libqhull.a libqhull_gcc5.4.0.a
 Line 16:
-ln -sf ../qhull/libqhull_gcc4.9.2.a ./libqhull.a
+ln -sf ../qhull/libqhull_gcc5.4.0.a ./libqhull.a
 Line 20:
-}}}make theLibrary
+}}}
 Line 28:
-mkdir lib_ifort15.0.2
mkdir mod_ifort15.0.2
mkdir obj_ifort15.0.2
+mkdir lib_ifort17.0.0
mkdir mod_ifort17.0.0
mkdir obj_ifort17.0.0
 Line 36:
-   objDir = obj_ifort15.0.2
   modDir = mod_ifort15.0.2
   libDir = lib_ifort15.0.2
+   objDir = obj_ifort17.0.0
   modDir = mod_ifort17.0.0
   libDir = lib_ifort17.0.0
 Line 52:
-ln -sf ../numrec-f90/lib_ifort15.0.2/libnumrec.a .
+ln -sf ../numrec-f90/lib_ifort17.0.0/libnumrec.a .
 Line 55:
-ln -sf ../numrec-f90/mod_ifort15.0.2/nr.mod .
ln -sf ../numrec-f90/mod_ifort15.0.2/nrtype.mod .
ln -sf ../numrec-f90/mod_ifort15.0.2/nrutil.mod .
+ln -sf ../numrec-f90/mod_ifort17.0.0/nr.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrtype.mod .
ln -sf ../numrec-f90/mod_ifort17.0.0/nrutil.mod .
 Line 65:
- * Netcdf is installed on Juropatest for different C and Fortran compiler versions.
+ * Netcdf is installed on Jureca for different C and Fortran compiler versions.
 Line 69:
-module load intel-para netCDF-Fortran/4.4.2
+module load intel-para netCDF-Fortran/4.4.4
 Line 99:
-ln -sf ../utils/lib_linux_ifc_15.0.2/libutils-icg1.a .
+ln -sf ../utils/lib_linux_ifc_17.0.0/libutils-icg1.a .
 Line 102:
-ln -sf ../utils/mod_linux_ifc_15.0.2/* .
+ln -sf ../utils/mod_linux_ifc_17.0.0/* .