Diff for "Jureca/LibrariesIfort17"

Differences between revisions 1 and 6 (spanning 5 versions)

Install Libraries on JUROPATEST

The libraries used by CLaMS are installed in directory /homec/jicg11/jicg1108

qhull

cd ~/qhull
make new  (Compilation mit gcc, s. Makefile)
mv libqhull.a libqhull_gcc4.9.2.a

cd ~/clams_lib
ln -sf ../qhull/libqhull_gcc4.9.2.a ./libqhull.a

cd ~
chmod -R 755 qhull

numrec

```
cd ~/numrec-f90

mkdir lib_ifort15.0.2
mkdir mod_ifort15.0.2
mkdir obj_ifort15.0.2
```
in Makefile.numrec:
- ```
   F90 = ifort
   objDir = obj_ifort15.0.2
   modDir = mod_ifort15.0.2
   libDir = lib_ifort15.0.2
```
```
make -f Makefile.numrec  new
```
The following error occurs:
catastrophic error: **Internal compiler error: internal abort** Please report this error along with the circumstances in which it occurred in a Software Problem Report. Note: File and line given may not be explicit cause of this error. compilation aborted for src/sprsin.f90 (code 1)
- => in Makefile.numrec: sprsin removed from progfilelist !!!
```
cd ~/clams_lib
ln -sf ../numrec-f90/lib_ifort15.0.2/libnumrec.a .

cd ~
chmod -R 755 numrec-f90
```

netcdf

Netcdf is installed on Juropatest for different C and Fortran compiler versions.

Load netcdf module:

module load intel-para netCDF-Fortran/4.2

If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include paths).

Compile Fortran program with NetCDF:

ifort -o progname progname.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz

After loading the netcdf module the following environment variables are expanded:
- PATH includes directory with netcdf binaries (ncdump)
- CPATH includes directory with include-files and netcdf-modules
- LD_LIBRARY_PATH includes directories with all needed libraries (netcdf, hdf5, zlib etc)

utils

Following files were adapted:

utils/Makefile
mkincl/platform.mk
mkincl/config/config.Linux_ifc

make theLibrary

cd ~/clams_lib
ln -sf ../utils/lib_linux_ifc_15.0.0/libutils-icg1.a .

cd ~/clams_mod
ln -sf ../utils/mod_linux_ifc_15.0.0/* .

cd ~
chmod -R 755 utils

-  ⇤ ← Revision 1 as of 2015-01-13 09:49:01 → 
  Size: 2079
  Editor: NicoleThomas
  Comment:
+   ← Revision 6 as of 2015-05-21 09:58:25 → ⇥
  Size: 2291
  Editor: NicoleThomas
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 10:
-mv libqhull.a libqhull_gcc4.4.7.a
+mv libqhull.a libqhull_gcc4.9.2.a
 Line 13:
-ln -sf ../qhull/libqhull_gcc4.4.7.a ./libqhull.a
+ln -sf ../qhull/libqhull_gcc4.9.2.a ./libqhull.a
 Line 24:
-mkdir lib_ifort15.0.0
mkdir mod_ifort15.0.0
mkdir obj_ifort15.0.0
+mkdir lib_ifort15.0.2
mkdir mod_ifort15.0.2
mkdir obj_ifort15.0.2
 Line 29:
-in Makefile.numrec:
 {{{
+ in Makefile.numrec:
  {{{
 Line 32:
-   objDir = obj_ifort15.0.0
   modDir = mod_ifort15.0.0
   libDir = lib_ifort15.0.0
+   objDir = obj_ifort15.0.2
   modDir = mod_ifort15.0.2
   libDir = lib_ifort15.0.2
 Line 41:
-catastrophic error: **Internal compiler error: internal abort** Please report this error along with the circumstances in which it occurred in a Software Problem Report.  Note: File and line given may not be explicit cause of this error.
compilation aborted for src/sprsin.f90 (code 1)
=> in Makefile.numrec: sprsin removed from progfilelist  !!!
+ The following error occurs: <<BR>> 
 ''catastrophic error: **Internal compiler error: internal abort** Please report this error along with the circumstances in which it occurred in a Software Problem Report.  Note: File and line given may not be explicit cause of this error. compilation aborted for src/sprsin.f90 (code 1)''

  => in Makefile.numrec: sprsin removed from progfilelist  !!!
-Line 47:
+Line 48:
-ln -sf ../numrec-f90/lib_ifort15.0.0/libnumrec.a .
+ln -sf ../numrec-f90/lib_ifort15.0.2/libnumrec.a .
-Line 50:
+Line 51:
-chmod -R 755 numrec
+chmod -R 755 numrec-f90
-Line 57:
+Line 58:
- * If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include path).
+ * Load netcdf module:
 {{{
module load intel-para netCDF-Fortran/4.2
}}}

 * If the netcdf module is loaded, "ncdump" and "ncgen" can be used and compilation of programs using netcdf is possible (without specifying any library or include paths).
-Line 64:
+Line 70:
- * Environment variables
+ * After loading the netcdf module the following environment variables are expanded:
-Line 72:
+Line 78:
-geändert:
Makefile
mkincl/platform.mk
mkincl/config/config.Linux_ifc
=> eingecheckt am 13.01.2015
+ Following files were adapted:
  * utils/Makefile
  * mkincl/platform.mk
  * mkincl/config/config.Linux_ifc
-Line 78:
+Line 83:
+ {{{
-Line 88:
+Line 94:
+}}}